ESyPred3D Web Server 1.0

Christophe Lambert and Eric Depiereux
Molecular Biology Research Unit , The University of Namur, Belgium.
Project supported by the F.R.I.A..
ESyPred3D - ESyPred3D is a new automated homology modeling program. The method gets benefit of the increased alignment performances of a new alignment strategy using neural networks. Alignments are obtained by combining, weighting and screening the results of several multiple alignment programs. The final three dimensional structure is built using the modeling package MODELLER. Please cite:
Lambert C, Leonard N, De Bolle X, Depiereux E.
ESyPred3D: Prediction of proteins 3D structures.
Bioinformatics. 2002 Sep;18(9):1250-1256

ESyPred3D queue status

Data and parameters input for the ESyPred3D server:

Your email address
Description (optional)
You can upload a sequence file

(Characters others than the standard 20 amino acids codes will be removed)

or paste your sequence

Advanced parameters

Use this PDB template (xxxx_y)
where xxxx is the PDB code and y is the chain

Do not use this PDB template (xxxx)
where xxxx is the PDB code

Output:

Summary of results
PDB format
PFRMAT format
PIR target-template alignment
Compress files using base64 (better for attach files)

Alignment Method using

Information about the ESyPred3D server:

ESyPred3D - ESyPred3D is a new automated homology modeling program. The method gets benefit of the increased alignment performances of a new alignment strategy using neural networks. Alignments are obtained by combining, weighting and screening the results of several multiple alignment programs. The final three dimensional structure is built using the modeling package MODELLER.

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Please send comments and enquiries to:

   Christophe LAMBERT

   University of Namur    :   Tel: +32-81-72-44-17 
   U.R.B.M.               :   Fax: +32-81-72-44-20
   Rue de Bruxelles, 61   :   E-mail: christophe.lambert@fundp.ac.be
   5000 Namur, Belgium    :           

Co-worker:


Thanks for fruitful discussions and help:


Bibliography:


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